Very insightful lecture. In comparing 2 datasets from the same platform, for example control vrs cancer, do you have to use the same soft thresholding power for the 2 groups or you have to use group specific soft thresholding power based on the picksoftthreshold code?
I always like to keep parameters as close as possible and in most cases I would suggest keeping the power the same for both group. There are occasional exceptions where the data is different enough that using different powers improves the comparison.
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Very insightful lecture. In comparing 2 datasets from the same platform, for example control vrs cancer, do you have to use the same soft thresholding power for the 2 groups or you have to use group specific soft thresholding power based on the picksoftthreshold code?
I always like to keep parameters as close as possible and in most cases I would suggest keeping the power the same for both group. There are occasional exceptions where the data is different enough that using different powers improves the comparison.
@@jeremymiller8193 Thanks so much for the reply!