BioPython Tutorial: Making Phylogenetic Trees in Python

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  • Опубликовано: 26 янв 2025
  • This tutorial goes through the basics of phylogenetic tree creation, from sequence data through alignments and concluding with tree figures. The full tutorial and examples are available here:
    github.com/tay...

Комментарии • 10

  • @tenerokdon4101
    @tenerokdon4101 3 года назад

    Thank you so much, this was extremely helpful. Very precise and to the point tutorial, while not giving anything for granted. In my master, they believe that, since we are Master students, we should be able to "learn on our own", so they just give you a bunch of exercises to do and they expect you to Google the results, without any prior information whatsoever (if anything, they'll link the documentation).
    Once again, thank you very much.

  • @Pantouflor
    @Pantouflor 2 года назад

    Thank you much for this tutorial, it is clear and concise.
    A nice addition would be to indicate how to input branch length and node support values annotations.

  • @mohitpoudel4022
    @mohitpoudel4022 2 года назад

    Superb tutorial.
    Thank you

  • @manueljara5226
    @manueljara5226 3 года назад

    Thank you very much for such an excellent tutorial!!!

  • @wp1300
    @wp1300 2 года назад

    Thank you for your excellent vedio! Here I have a question: how to perform bootstrap test when construct the phylogenetic tree using biopython? Thank you!

  • @minervai5907
    @minervai5907 3 года назад

    Hello, Thank you so much for this video.
    Do we need to download Clustal- W in order to the align the sequences?

  • @Moyano__
    @Moyano__ 3 года назад

    Hello. I have a doubt and I don't seem to find any sort of tutorial for this, or documentation, or function. Having two or more different trees which share some taxa but could have a different structure (let's say one is the base tree and the other is a bonus tree with more taxa in different order), how can I actually merge them into a new supertree? I would want to do this for multiple trees and to end up with a big supertree that could be a little random but still would be "coherent" and connected.

  • @celuxplaneta44
    @celuxplaneta44 7 месяцев назад

    muchas gracias, me ayudaste mucho

  • @francescoapg
    @francescoapg 3 года назад

    Useful

  • @eleeline3376
    @eleeline3376 3 года назад

    thank you!!