TCGA data analysis using GEPIA2, Part-2 | Hindi

Hi friends. This is the fifth video of the series. In the last video, we covered an online tool GEPIA2, which we used to analyze TCGA gene expression data. This video covers the remaining options of GEPIA2 tool.
Analysis covered
#gene expression correlations
#Isoform specific expression comparison between normal and tumor tissues
#determine association of isoform expression with patient survival
#to determine best differentially expressed genes in any cancer type.

[@gauravnag2120]

Good to hear you Mohit, Good luck )

[@beenatb4355]

Thanks for the great session....

[@exploresciencewithpritam465]

GBM me subtypes nhi select hota hai kya?

[@Oncoscholar]

Hi Pritam. GEPIA has included both histological subtypes in LGG and molecular subtypes in GBM. Although GBM subtypes are based on Verhaak et al., 2010. I still recommend you to use classification by Wang et al ., 2017 (Its new classification from same lab where they just removed neural subtypes).

[@bipintiwari6249]

Is that software only work on tumors cases.

[@Oncoscholar]

Hi Bipin. This webserver only contains data from TCGA study, which covers different types of cancers. You can also suggest something of your interest here.