Bioinformatics practical 2 how to run NCBI BLAST

Поделиться
HTML-код
  • Опубликовано: 28 окт 2024

Комментарии • 42

  • @k.network8617
    @k.network8617 6 лет назад +11

    I am SOOO in love with Shomu's Biology. This channel has helped me immensely with my degree❤❤❤. Way more than I could have thought. I'm so grateful 😊. THANK YOU!!!!!

  • @ayeshamishaal3779
    @ayeshamishaal3779 3 года назад +5

    THIS HELPED ME A LOT FOR MY PRESENTATION A BIG THANKS ACROSS THE BORDER....THANKU THANKU THANKU

  • @zebriahpatiencezhuwao9002
    @zebriahpatiencezhuwao9002 2 года назад +2

    You're a hero! I salute you sir. Thank you

  • @hania.1220
    @hania.1220 Год назад +1

    As always, you are the best! ❤️🇮🇷

  • @anjaliparashar8855
    @anjaliparashar8855 8 лет назад +1

    the way of explaining is awsmmm....plz explain about perl also..

  • @yuktanihalani
    @yuktanihalani 3 года назад +1

    Sir how to read the result like nos. OF BLAST HITS obtained and all

  • @devikas8740
    @devikas8740 3 года назад +1

    Hello, is there an option like 'more titles' after we get blast results ? Is yes where is that located?

  • @bapaimallik5173
    @bapaimallik5173 8 лет назад +2

    At 17.15 minutes you are showing that the identity numbers of the human prion protein are different. The reason they are different is because the initial ID is the ID in the NCBI database whereas the second ID beginning with P is the ID in the Swiss prot database as expected because you are using Swiss Prot to search the database.

  • @aregawiataklti2177
    @aregawiataklti2177 7 лет назад +1

    Helpful and could you help me on primer design as follows. please help me how to design it
    EXERCISE 13: Manual Design of Primers
    1. Go to nucleotide database and pick a gene called protein kinase
    2. Download more related nucleotide and protein sequences of your gene of interest
    3. Multiple align; do the alignment similar sequence types together, why?
    4. Design primers with a amplicon length 500bp onto conserved regions.
    5. What do you think the practical implication of getting a primer from conserved regions?
    6. Evaluate your primer of interst according good primer properties
    7. Do you have any alternative method(s) to design primers using web tools?

    • @mayamaya-ry3eg
      @mayamaya-ry3eg 7 лет назад

      Aregawi Ataklti omg please make the video how to design primers

  • @subhradeepsarkar4825
    @subhradeepsarkar4825 9 лет назад +2

    Thank u sir u r a saviour.....

  • @saritajata2781
    @saritajata2781 5 лет назад +2

    Sir app buhut aacha padate ho

  • @subhashreedhal4051
    @subhashreedhal4051 6 лет назад +1

    Sir plz maximum parsimony and maximum likelihood Ka Video upload kariye

  • @flutteringberret7327
    @flutteringberret7327 9 лет назад +2

    Thanks. very helpful for beginner like me

  • @saadmuslim4455
    @saadmuslim4455 4 года назад

    at 17:13, I think it was by mistake, the first accession number is not the accession of query sequence but it refers to the observed or obtained alignment results

  • @gauravmudgal841
    @gauravmudgal841 9 лет назад +2

    simply marvelous and understandable....

  • @bakulverma8887
    @bakulverma8887 3 года назад

    Very helpful video....it really helped me in my assignment.....thank you ^_^

  • @shomilverma3692
    @shomilverma3692 4 года назад +2

    Bhaiya mst pdhaya apne wowwwwwww

  • @papridas8979
    @papridas8979 3 года назад

    This is really helpful🙏

  • @rabiyakhan7460
    @rabiyakhan7460 2 года назад

    how to find out which protein it is using a sequence

  • @al-bairooniacademia
    @al-bairooniacademia 3 года назад

    Respected sir if I have only single sequence how I can align by mega x

  • @Julidailyvlog-t7q
    @Julidailyvlog-t7q Год назад

    hlo i am workiing on drug desine plz help and gaide what i do

  • @uwimanaliberathe8566
    @uwimanaliberathe8566 6 лет назад

    I want to save the results in colors but, it can not.what will i do?

  • @radred1648
    @radred1648 5 лет назад

    Even tejender Pratap Rana Singh is watching you bro

    • @craerae
      @craerae 5 лет назад +1

      Bro are you happy with shomus explanation?

  • @chuskihouse8776
    @chuskihouse8776 4 года назад

    what is the other significance of e value

  • @roibailey6837
    @roibailey6837 6 лет назад +1

    Conducts basic and applied research in computational, mathematical, and theoretical problems in molecular biology and genetics, including genome analysis, sequence comparisons, sequence search methodologies, macromolecular structure, dynamics and interaction, and structure/function prediction
    Establishes collaborative research projects in computational molecular biology with biologists, chemists, mathematicians, and computer scientists in NIH intramural laboratories, other government agencies, academia, and industry
    Consults and advises governmental agencies and research laboratories in the application of computer-based analytical tools for studying molecular biology
    Interacts with molecular biology groups to enhance wet-bench, laboratory-based research through the application of computational and theoretical approaches

  • @panorama85
    @panorama85 3 года назад

    Shomu vai namaste.
    i cannot save file in FASTA formet. I have no suitable app for this. What can l do now?

  • @alizahranmohd4095
    @alizahranmohd4095 4 года назад

    hellow. l follow the same procedure but when l click blast l do not get any progress.

  • @joydeepmahata5579
    @joydeepmahata5579 3 года назад

    Love you sir

  • @zebriahpatiencezhuwao9002
    @zebriahpatiencezhuwao9002 2 года назад

    Unfortunately with all the information you've provided sir, it's still not sensible for me to proceed with my project

  • @saliougueye8671
    @saliougueye8671 10 лет назад

    THANK U SIR

  • @km2052
    @km2052 8 лет назад

    thanks