What to do when a plasmid comes for you: agar stab to plate to glycerol stock, miniprep & sequencing

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  • Опубликовано: 6 июн 2022
  • I ordered a bunch of plasmids, and many of them come as agar stabs, where they've taken bacteria with the plasmid and stabbed it into a tube of agar. So it's like a Petri dish in a tube. My gameplan:
    - streak a plate
    - isolate a colony
    - grow a 5mL overnight culture (LB + appropriate antibiotic)
    - make a glycerol stock
    -- take 500μL of that culture & add to 500μL sterile glycerol; invert to mix & store in -80°C freezer - should be good for years if you avoid freeze-thaws
    - miniprep the rest of the overnight culture to isolate the plasmid
    - send the plasmid for sequencing
    - if the sequence checks out, do whatever the heck you got it for! (subclone into a different vector, transform into expression cells, etc.)
    blog form: bit.ly/plasmid_prepping
    more on cloning cells: blog form: bit.ly/dh5alpha ; RUclips: • DH5α strains and a PSA...  
    more on expression cells: bit.ly/bl21_rare_codons ; RUclips: • Bacterial expression s...
    more on molecular cloning: bit.ly/molecularcloningguide ; RUclips: • Molecular cloning over...
    more on transformation: bit.ly/transformheatshock ; RUclips: • Bacterial transformati...
    more on T7 RNAP: bit.ly/t7rnap
    more on mini preps: bit.ly/minipreps ; RUclips: • Miniprep science - wha...  
    more on glycerol solution-making: • Making a 80% glycerol ...
    some tips for pipetting & working with viscous solutions: blog: bit.ly/pipetting_problems ; RUclips: • Pipetting viscous liqu...
    random practical lab tips & tricks: bit.ly/lab_tricks_page
    link to the plasmid I was talking about: www.addgene.org/174866/
    helpful guide from addgene: www.addgene.org/recipient-ins...
    more about all sorts of things: #365DaysOfScience All (with topics listed) 👉 bit.ly/2OllAB0 or search blog: thebumblingbiochemist.com                             
                                   
    #scicomm #biochemistry #molecularbiology #biology #sciencelife #science #realtimechem
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Комментарии • 4

  • @Dominoes0
    @Dominoes0 17 дней назад

    This video is great (The diagrams, narration, show+tell) - it's more detailed and actionable than the videos and written guides provided by Addgene itself!

  • @Simon-si3ec
    @Simon-si3ec 4 месяца назад

    Super helpful, thanks so much, just received my first plasmid and needed to visualize all these steps.