Hey Maria. Thanks a for nice and detailed tutorial to ribbon and split threader! Just quickly checking if we can use these tools for a custom genome specifically for any plant genome?
Thank you.... a transcript with a blog post would be ideal too, could easily generate this with modern AI tool too, however it be a nicer scenario to have a curated blog post from the "truly inside analysis folks team"....thanks.
This is very good content! Please keep it up! Dr Gerry Higgins (took the 2013 CHSL advanced sequencing course in which Mike Shatz) was an instructor.
15:53 hearts for you as well for making this video
Hey Maria. Thanks a for nice and detailed tutorial to ribbon and split threader! Just quickly checking if we can use these tools for a custom genome specifically for any plant genome?
Yes you can! They infer the reference from the coverage bed file in SplitThreader and from the BAM in Ribbon.
@ thanks for your response. I will try your suggestions for my custom genome. Thank you!
Thank you.... a transcript with a blog post would be ideal too, could easily generate this with modern AI tool too, however it be a nicer scenario to have a curated blog post from the "truly inside analysis folks team"....thanks.
Looks great! Is this open-source?
Yes, it is! github.com/marianattestad/ribbon