after uploading file to find motifs on meme motif this message appears and the area where file is loaded becomes red in color and do not proceed further. " """✘ Sequence identifier duplicated - identifiers must be unique. Found a duplicate sequence identifier on line 37."""""" please help me in resolving the issue
In Genome wide studies, If one gene of species have more than one transcript variants then we will display the structure of primary transcripts or all. please guide me.
1.If your gene has more than one transcript, choose the complete transcripts, then do the alignment, if there is difference in sequence even difference of one bp, then take all that transcripts which have sequence differences, If no difference in sequence of all transcript, then you can take any one. 2. If two transcripts have the same sequence but there start end position on chromosome is different then you also take that transcript as well.
you can find the series of such type of videos related to genome wide analysis of the protein family in the channel. only need to open the channel, go to playlist and find all the videos related to genome wide analysis.
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after uploading file to find motifs on meme motif this message appears and the area where file is loaded becomes red in color and do not proceed further. " """✘ Sequence identifier duplicated - identifiers must be unique.
Found a duplicate sequence identifier on line 37."""""" please help me in resolving the issue
Error in your sequences
How to remove such error from the sequence?
@@alshyeeeeee003 Use this method as describe in the video. No need of MEME webtool. ruclips.net/video/LweksfJrChE/видео.html
Sir, why the line is different? Is it becuase of the length of the sequence?
You talking about which lines
i like the way you make concept easy to understand thank you so much.. please upload more video
Keep watching
Great. very well explained.
Glad you liked it
In Genome wide studies, If one gene of species have more than one transcript variants then we will display the structure of primary transcripts or all. please guide me.
1.If your gene has more than one transcript, choose the complete transcripts, then do the alignment, if there is difference in sequence even difference of one bp, then take all that transcripts which have sequence differences, If no difference in sequence of all transcript, then you can take any one.
2. If two transcripts have the same sequence but there start end position on chromosome is different then you also take that transcript as well.
Very good Dr. Sab...
Thanks, So nice of you
sir when i am upload seq in meme suit , then message is appeared your seq is long
Please check your sequence. May be seq did not have > sign or some other error in name. Please check carefully
Sir , can you tell me how you prepare the motif file
Its a protein sequence file
Masha Allah
Good way of teaching
Thanks for Watching. Appreciated
slam sir : i am trying to motif analysis but i canont do it
what is the error
sir when i upload motif file in meme suit then message is appeared your seq is longer not in alphabetical order@@genomewidestudy
Great work
thanks for comment
@@genomewidestudy traped in MEME analysis need your help Dr sahb
The question is how can we estimate or put a command to the MEME for how many motifs we want to find? What is the basis?
on the basis of conserved regions among seq
@@genomewidestudy can you give an example
Very informative video thank you so much sir please make more such videos 🙏
you can find the series of such type of videos related to genome wide analysis of the protein family in the channel. only need to open the channel, go to playlist and find all the videos related to genome wide analysis.
Very appreciated, thanks, Bro!!!
Any time!
Thankyou very much for these videos, these videos are very helpful....
Glad you like them!
nice work. informative
Excellent
Thank you so much 😀
Very nice sir.thanku
so nice of you. Thanks
Excellent 👌
Nice 👍