Sir Please tell me what changes we need to do in script files if we take any other protein and please sir continue Posting Videos You inspire me To pursue my Career in bioinformatics sir 😊
The simplest way is not change the script. Just change the name of protein as per your Script. Thank you for liking inshaAllah I will keep posting. Remeber me prayers
Just use the same names as I have used in the tuturial. Download your protein and change the name as I have given in the tutrial. If still you cant get this contact me at hammad.ismail@uog.edu.pk
you can use the template to identify both in single protein. As being the software Modeller use the templates to predict the structures based on available templates. You can use the One perfect structure to find the missing amino acids and atom in same way. For more details you can use look into modeller official tutorials at salilab.org/modeller/wiki/Main_Page
If you want to predict the whole protein then download fasta from NCBI and use as it. Or if you want to use as a separate then can you use them separately
Sir Please tell me what changes we need to do in script files if we take any other protein and please sir continue Posting Videos You inspire me To pursue my Career in bioinformatics sir 😊
The simplest way is not change the script. Just change the name of protein as per your Script.
Thank you for liking inshaAllah I will keep posting. Remeber me prayers
@Coach.ismail May Allah Grant you all happiness but sir please elaborate the solution you just provided
Just use the same names as I have used in the tuturial. Download your protein and change the name as I have given in the tutrial. If still you cant get this contact me at hammad.ismail@uog.edu.pk
@@Coach.ismail thanku sir
Thank you
Hello sir, how to fix both the missing amino sequence and missing atoms?
you can use the template to identify both in single protein. As being the software Modeller use the templates to predict the structures based on available templates. You can use the One perfect structure to find the missing amino acids and atom in same way. For more details you can use look into modeller official tutorials at salilab.org/modeller/wiki/Main_Page
@@Coach.ismailthank you
@@moiphenphom5095 welcome
Sir what should I do if my Fasta sequence of proteins has 2 chains A and B
If you want to predict the whole protein then download fasta from NCBI and use as it. Or if you want to use as a separate then can you use them separately
@Coach.ismail thanku sir
Sir I'm struggling with making an alignment file please help me
Sir Is there any alternative of modeller for fixing amino acid residues In a pdb Structure
What problem you ate facing