- Видео 66
- Просмотров 74 591
dfcidatascience
США
Добавлен 29 май 2020
Shaping the future of #datascience. Powering #cancerresearch at @DanaFarber.
We are the Department of Data Science at Dana-Farber Cancer Institute. We drive cancer research through innovation and collaboration in the quantitative sciences. Our faculty and staff are expert biostatisticians, computational biologists and knowledge systems engineers, unified by a commitment to improving cancer care for all. Learn more at ds.dfci.harvard.edu.
We are the Department of Data Science at Dana-Farber Cancer Institute. We drive cancer research through innovation and collaboration in the quantitative sciences. Our faculty and staff are expert biostatisticians, computational biologists and knowledge systems engineers, unified by a commitment to improving cancer care for all. Learn more at ds.dfci.harvard.edu.
Introduction to Multiverse Meta Analysis
Filippo Gambarota, psychologist, postdoctoral researcher in Psychometrics at the University of Padova, Department of Developmental Psychology and Socialization (DPSS) and member of the Psicostat research group.
In this session we will introduce the concept of multiverse analysis applied to meta-analysis from an exploratory and inferential point of view. Multiverse analysis is a recently developed approach where given a certain research question and a dataset, authors conduct and report all plausible statistical analyses. Usually only one analysis is reported and the impact of other plausible alternatives (researcher’s degrees of freedom) on the final results is often neglected. We will see...
In this session we will introduce the concept of multiverse analysis applied to meta-analysis from an exploratory and inferential point of view. Multiverse analysis is a recently developed approach where given a certain research question and a dataset, authors conduct and report all plausible statistical analyses. Usually only one analysis is reported and the impact of other plausible alternatives (researcher’s degrees of freedom) on the final results is often neglected. We will see...
Просмотров: 26
Видео
Deeper Differential Expression Analysis with Shrinkage Correction
Просмотров 456 месяцев назад
Dr. Jared Brown earned his PhD from the University of Wisconsin, Madison, Department of Statistics and is currently completing his Postdoctoral Fellowship in the lab of Dr. Irizarry at Dana Farber Cancer Institute, Department of Data Science. His research areas cover various topics relating to methods development for the analysis of -omics data with a particular focus in latent space embeddings...
Cancer Risk Prediction, Early Detection and Minimal Residual Disease
Просмотров 426 месяцев назад
Cristian Tomasetti, Ph.D. Director, Center for Cancer Prevention and Early Detection, City of Hope Professor and Director, Division of Mathematics for Cancer Evolution and Early Detection, Department of Computational & Quantitative Medicine, City of Hope Cristian Tomasetti, Ph.D., is director of the Center for Cancer Prevention and Early Detection at City of Hope, director of the Division of Ma...
Research Administration and You
Просмотров 518 месяцев назад
Shawn Mims is a Research Administrator Manager and Love Nickerson is a Senior Research Administrator. How research administrators support you in your research. Presenters will discuss the nuts and bolts of grants, compliance, and beyond. This is intended for all who collaborate: faculty, post docs, statisticians, and computational biologists. Our #DataScience Training Sessions offer hands-on tr...
DFCI - Data Science Centralized Data Access and Sharing
Просмотров 788 месяцев назад
Selvi Guharaj is a computational biologist in the DFCI - Department of Data Science. She is primarily responsible for centralizing and managing datasets of interest to our researchers under the DFCI - DS computing systems. The workshop on the `DFCI - DS Centralized Data Access and Sharing` concentrates mainly on topics related to the department's data access/download forms and procedures and th...
2024 Marvin Zelen Symposium
Просмотров 668 месяцев назад
The Marvin Zelen Symposium is our flagship annual conference promoting #datascience in the public sphere. The event is named after Marvin Zelen, PhD, founder of the Department of Data Science at Dana-Farber Cancer Institute and an important figure in bringing applied #statistics to prominence. #Zelen2024 Agenda & Speakers Drs. Jayasekera and Fillmore requested that their videos not be shared at...
Statistics for Computational Biology Projects
Просмотров 2768 месяцев назад
Erica Holdmore, Ph.D. is a Computational Biologist in the NSG Bioinformatics Group. Erica earned a bachelors degree from Florida State University, a master from California State University Northridge, and a doctorate from Yale University. She has hands-on experience with every step of the NGS pipeline, from sample collection to library prep to data analysis. Erica applies her expertise in devel...
Introduction to scRNA-seq data analysis and interpretation using Seurat
Просмотров 3859 месяцев назад
Yujie Guo, research assistant in Dr. Heng Li's lab. She's working on cancer genome assembly. Seurat is an R package designed for QC, analysis, and exploration of single-cell RNA-seq data. It has been widely used in both dry lab and wet lab settings for its robustness and scalability. In this coding workshop, we will demonstrate the workflow of Seurat, use published matched tumor-normal data, an...
Introduction to scRNA-seq and data preprocessing
Просмотров 2789 месяцев назад
Jeremy Simon, PhD, research focuses on the genetic and environmental effects on gene expression and gene regulation in human disease. There are many useful applications of single-cell or single-nucleus RNA-seq technologies to better understand cancer biology. In this introductory workshop, we will discuss some of the advantages of adopting single-cell approaches, frequently utilized technologie...
R and RStudio Quickstart for Data Science Professionals - Robert Shear
Просмотров 22510 месяцев назад
This workshop examines R's essential features and functions, a step beyond an initial introduction. The session addresses the use of RStudio, some useful details about R data structures, and basic best practices. The target audience is Biostatisticians, Computational Biologists, and Data Scientists familiar with R who wish to improve their R language skills more rapidly. Our #DataScience Traini...
Quantitative Methods in Implementation Research: Concepts, Goals, and Applications
Просмотров 14610 месяцев назад
Dr. Donna Spiegelman, ScD, holds distinguished positions at Yale University, where her expertise spans the realms of biostatistics, cardiovascular medicine, and statistics and data science. As the Susan Dwight Bliss Professor of Biostatistics and Professor of Cardiovascular Medicine at the esteemed Yale School of Medicine, she brings a wealth of knowledge and experience to her roles. Additional...
Roderick Little, PhD - Methods for the Analysis of Data with Missing Values
Просмотров 17211 месяцев назад
Dr. Roderick Little holds the distinguished position of Richard D. Remington University Professor of Biostatistics at the University of Michigan School of Public Health. As a seasoned academic, he also serves as a Professor in the Department of Statistics and holds the title of Research Professor at the Institute for Social Research. Dr. Little is a notable figure in the field of biostatistics,...
Analyzing Big EHR Data - Optimal Cox Regression Subsampling Procedure with Rare Events
Просмотров 113Год назад
Malka Gorfine, PhD Professor, Department of Statistics, Tel Aviv University, Israel Dr. Gorfine's research interests are in disease risk estimation and prediction using candidate genes and environmental risk factors from both family and case-control survival data; statistical genetics; non-parametric statistics; biostatistics; machine learning. www.tau.ac.il/~gorfinem/ Frontiers in Biostatistic...
Bill Lotter, PhD: AI in Medical Imaging: Current State & Future Opportunities
Просмотров 276Год назад
Bill Lotter, PhD, is an Assistant Professor at the Dana-Farber Cancer Institute and the Harvard Medical School. In this talk, he discusses the current state of AI in medical imaging and his research in the field.
Elana Fertig, PhD - Forecasting Pancreatic Carcinogenesis from Spatial Multi-omics
Просмотров 445Год назад
Elana Fertig, PhD a Professor of Oncology and Professor of Biomedical Engineering. She is the Division Director of Oncology Quantitative Sciences, Sidney Kimmel Comprehensive Cancer Center, Johns Hopkins University. Dr. Fertig advances a new predictive medicine paradigm in oncology by converging systems biology with translational technology development. Her computational work combines mathemati...
Model-robust and Efficient Covariate Adjustment for Cluster-randomized Experiments
Просмотров 167Год назад
Model-robust and Efficient Covariate Adjustment for Cluster-randomized Experiments
Machine Learning in Medical Imaging: From New Techniques to Clinical Translation
Просмотров 624Год назад
Machine Learning in Medical Imaging: From New Techniques to Clinical Translation
Using the Case Study of Atezolizumab Development to Rethink Early Phase Oncology Trial Design
Просмотров 147Год назад
Using the Case Study of Atezolizumab Development to Rethink Early Phase Oncology Trial Design
Peter Mueller - A Nonparametric Bayesian Approach to Use RWD in Clinical Trial Design
Просмотров 379Год назад
Peter Mueller - A Nonparametric Bayesian Approach to Use RWD in Clinical Trial Design
COVID Data-Driven Policy: NC DHHS’s Use of Data for Pandemic Response
Просмотров 942 года назад
COVID Data-Driven Policy: NC DHHS’s Use of Data for Pandemic Response
Wendy London, PhD and Clement Ma, PhD - Design and Implementation of Bayesian Adaptive Phase1 Trials
Просмотров 2032 года назад
Wendy London, PhD and Clement Ma, PhD - Design and Implementation of Bayesian Adaptive Phase1 Trials
Biomarkers in Cancer Research - Nabihah Tayob, PhD
Просмотров 7662 года назад
Biomarkers in Cancer Research - Nabihah Tayob, PhD
Tree-based Ensembling Strategies for Handling Heterogeneous Data
Просмотров 1972 года назад
Tree-based Ensembling Strategies for Handling Heterogeneous Data
2022 Marvin Zelen Symposium: Data Visualization
Просмотров 7812 года назад
2022 Marvin Zelen Symposium: Data Visualization
Considerations for Extracting Real-World Evidence from Real-World Data
Просмотров 3532 года назад
Considerations for Extracting Real-World Evidence from Real-World Data
Dose Optimization for Anti-Cancer Agents in the Era of Immunotherapy and Targeted Agents
Просмотров 7182 года назад
Dose Optimization for Anti-Cancer Agents in the Era of Immunotherapy and Targeted Agents
Giovanni Parmigiani, PhD - Cancer on the Way to Mars
Просмотров 3063 года назад
Giovanni Parmigiani, PhD - Cancer on the Way to Mars
M. Regan, ScD - Treatment-free Survival as a Novel Outcome Measure of Immuno-oncology based Therapy
Просмотров 1733 года назад
M. Regan, ScD - Treatment-free Survival as a Novel Outcome Measure of Immuno-oncology based Therapy
Suyu Liu, PhD - A Bayesian Phase I/II Trial Design for Immunotherapy
Просмотров 4653 года назад
Suyu Liu, PhD - A Bayesian Phase I/II Trial Design for Immunotherapy
Holly Janes, PhD - COVID Vaccine Efficacy Trial Designs, Open Questions and Statistical Challenges
Просмотров 2783 года назад
Holly Janes, PhD - COVID Vaccine Efficacy Trial Designs, Open Questions and Statistical Challenges