Tooling Around the Next-Generation File Format OME-Zarr

From the Workshop ‘Euro-BioImaging’s Guide to FAIR Bioimage Data 2024’ (23 May 2024)
Presenter: Buğra Özdemir, Euro-BioImaging Bio-Hub, EMBL Heidelberg, Germany
Topics: next-generation file formats, features of OME-Zarr, NGFF viewer ecosystem: n5-reader and Vizarr, image conversion to OME-Zarr (BatchConvert), image processing in OME-Zarr (ome_zarr_pyramid)
BatchConvert: github.com/Euro-BioImaging/Ba...
Ome_zarr_pyramid: github.com/Euro-BioImaging/om...
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