Mastering RNA-Seq (NGS Data Analysis) - A Critical Approach To Transcriptomic Data Analysis

This RNA-seq workshop will address critical issues related to Transcriptomics data, like:
Processing raw Next Generation Sequencing (NGS) data:
1. Next Generation Sequencing data preprocessing:
Trimming technical sequences
Removing PCR duplicates
2. RNA-seq based quantification of expression levels:
Conventional pipelines (looking at known transcripts)
Identification of novel isoforms
Analysis of Expression Data Using Machine Learning:
3. Unsupervised analysis of expression data:
Principal Component Analysis
Clustering
4. Supervised analysis:
Differential expression analysis
Classification, gene signature construction
5. Gene set enrichment analysis
The workshop will include hands-on exercises utilizing public domain datasets:
breast cancer cell lines transcriptomic profiles (genomebiology.biomedcentral.c...,
patient-derived xenograft (PDX) mouse model of tumor and stroma transcriptomic profiles (www.oncotarget.com/index.php?j...[]=8014&path[]=23533), and
processed data from The Cancer Genome Atlas samples (cancergenome.nih.gov/).
Team: The workshops are designed by the researchers at the Tauber Bioinformatics Research Center at University of Haifa, Israel in collaboration with academic centers across the US. Technical support for the workshops is provided by the Pine Biotech team.

[@sambhavmishra1873]

Excellent...thank you so much !!

[@manishupadhyay1017]

wow, nice

[@omicslogic]

Thanks - please check out other workshops we are doing: edu.t-bio.info/workshops/

[@surajitbasak5260]

How to analyse fragmented RNA genome from NGS raw data to curated genome?

[@Annielovett1]

wish this valuable lecture had better quality of audio... thank you

[@omicslogic]

sorry about that - you can check out the full course here: edu.t-bio.info

[@mfnasir7450]

I want to upload my data in .fastq to the server for bisulphite sequencing analysis but the option is not available, i want to run my data to find hypermethylated genes

[@omicslogic]

Please mail us at [e-mail]

[@omicslogic]

Better quality sound and shorter version of this workshop can be found in our training program videos, for example: ruclips.net/video/JVmWuQUbD3s/видео.html

[@TT-vd7sf]

As white as it gets... Geez

[@omicslogic]

what do you mean by that comment?