How could I adapt this to compare an anatomical structure with a theoretical structure such as a perfect sphere? trying to calculate sphericity of a structure for example.
Hi, thanks a lot for this video. Is there any way to accurately warp to specific configurations of certain specimens on the PCA? The best way I can think of is assuming -100 and 100 on the PC slider correspond to the lowest and highest coordinates of the specimen on those extremes of the PCs and scale the PC slider for each specimen accordingly, which is really tedious and uncertain.
would like to know how to make the data set by plotting on my images with in 3-D slicer to create a landmark set for geometric analysis. I understand how to plot the landmarks, but l'm not sure how to export the landmark data per each individual case, to later combine all for geometric analysis as a data set
How could I adapt this to compare an anatomical structure with a theoretical structure such as a perfect sphere? trying to calculate sphericity of a structure for example.
What an excellent walk through of the plugin!
Hi, thanks a lot for this video. Is there any way to accurately warp to specific configurations of certain specimens on the PCA? The best way I can think of is assuming -100 and 100 on the PC slider correspond to the lowest and highest coordinates of the specimen on those extremes of the PCs and scale the PC slider for each specimen accordingly, which is really tedious and uncertain.
would like to know how to make the data set by plotting on my images with in 3-D slicer to create a landmark set for geometric analysis. I understand how to plot the landmarks, but l'm not sure how to export the landmark data per each individual case, to later combine all for geometric analysis as a data set
I usually save the markups as an fcsv and then change the extension to csv if I want just one specimens landmarks
Is there a way to export the animation of PC warping?
i used obs to record
for some reason, it doesnt work with .json files for me :(