Differential expression in Python with pyDESeq2

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  • Опубликовано: 12 июл 2024
  • Analyze RNAseq counts data with a Python implementation of DESeq2. I cover basic differential expression analysis, PCA plots, GSEA, heatmaps, and volcano plots.
    Github:
    github.com/mousepixels/sanbom...
    The samples include normal human cell control and replicative senescence cells from NCBI accession GSE171663
    0:00 Intro
    0:30 Differential expression
    7:30 PCA
    8:30 GSEA
    11:04 Heatmap
    15:10 Volcano
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