7 Assign Taxonomy with DADA2
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- Опубликовано: 8 сен 2024
- This video shows how to assign taxonomy with DADA2 in Chipster.
DADA2 supported reference files:
benjjneb.githu...
DADA2 taxonomy:
benjjneb.githu...
Assign species recommendations:
Robert. C. Edgar, (2018), Updating the 97% identity threshold for 16S ribosomal RNA OTUs. pubmed.ncbi.nl...
Naive Bayesian classifier:
Wang, Q. et. al. (2007). Naive Bayesian classifier for rapid assignment of rRNA sequences into the new bacterial taxonomy. www.ncbi.nlm.n...