GNPS - Feature Based Molecular Networking - Beginner Networking Tutorial

In this tutorial we highlight how to use run Feature Based Molecular Networking at GNPS with a quantification table and MS2 spectra output from MZmine2. The accompanying youtube video highlighting how to perform feature detection in MZmine2 can be found here:
• GNPS - Feature Based M...
Accompanying written documentation:
ccms-ucsd.gith...
Downloaded Files Used in Tutorial:
Quantification File: ftp://massive.ucsd.edu/MSV000082678/updates/2018-08-02_lfnothias_4ee107d3/other/MZmine-GNPS_AG_test_featuretable.csv
MS2 Spectra MGF: ftp://massive.ucsd.edu/MSV000082678/updates/2018-08-02_lfnothias_4ee107d3/other/MZmine-GNPS_AG_test_GNPS.mgf
Metadata File: ftp://massive.ucsd.edu/MSV000082678/other/metadata_GNPS_table_AMG_key_ones_cleaned.txt
Demonstration Feature Based Molecular Networking GNPS Job: gnps.ucsd.edu/...
Checkout GNPS to perform Molecular Networking, Spectral Library Search, Molecular BLAST, and more!
gnps.ucsd.edu
ccms-ucsd.gith...
Questions? Post on the forum!
groups.google....

[@elianaalvarezvaldez3841]

Hello, I would like to know if you have personalized courses for software management or do you know of any institute that does it and certifies the process?

[@wonderfulwinnder]

Hi, I use progenesis qi to process my data. I wonder that can the GNPS FBMN make use of the annotations (identifications) already produced by progenesis qi using its database search and to label the nodes GNPS network does not produce any match? thanks

[@krittimaanekthanakul5530]

Hi, I also use ProgenesisQI for my data. Could you run FBMN with your data?

[@wonderfulwinnder]

@@krittimaanekthanakul5530 not always work. Switch to unifi