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REDCapTidieR: Extracting REDCap Databases into Tidy Tibbles

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  • Опубликовано: 15 авг 2024

Комментарии • 1

  • @DanielaVargasRobles
    @DanielaVargasRobles 11 месяцев назад

    Thank you for creating this tool! I am working on a big REDCap project that is longitudinal, multi-arm, and repeated. However, I am encountering an error and multiple warnings when running the following code. Could you please advise me on how to resolve this?
    data=read_redcap(redcap_uri=uri, token=token) |>
    + bind_tibbles()
    Error in `clean_redcap_long()`:
    ✖ Instruments detected that have both repeating and nonrepeating instances
    defined in the project: coach_date, coach_dietician, coachcall_mode, and
    coaching_contact_log_complete
    Run `rlang::last_trace()` to see where the error occurred.
    Warning message:
    In read_redcap(redcap_uri = uri, token = token) :
    ! Some instruments exist in the metadata but are not found in the database export.
    ℹ This can happen when the user privileges are not set to allow exporting certain
    instruments via the API.
    ! Instrument `baseline_questionnaire` is missing fields `baseline_visit_date`,
    `type_of_patient`, and `dietitian_coaching`.
    Also, I would want to choose particular "fields", "forms" and "events" to export. Do I have any option? Thanks!