Everything You Could Want To Know About PCR

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  • Опубликовано: 13 янв 2025

Комментарии • 181

  • @joshuahames5782
    @joshuahames5782 6 лет назад +83

    Hello Justin,
    I just wanted to tell you that I really love your channel, and that you've inspired me to switch from computer science to a biology major.
    My entire life I KNEW I wanted to be a software engineer and I even completed a AA in IT.
    But your videos (and a few others) made me realize that I have a far greater passion for plants and molecular biology.
    I've enrolled at the University of Calgary majoring in plant biology, and I hope to eventually specialize in genetics.
    Thank you so much for sharing your hobby and passion with the world.

    • @jskratnyarlathotep8411
      @jskratnyarlathotep8411 4 года назад +2

      but you'll need your IT skills anyways)

    • @Stealthsilent1337
      @Stealthsilent1337 2 года назад

      Dude, change the human genome, make people better, fix the world.

    • @ParadoxMHFU
      @ParadoxMHFU Год назад +1

      hows the biology degree going?

    • @commandcracker8635
      @commandcracker8635 Год назад

      I’m not even out of high school and I’m having similar thoughts. As this comment was made 4 years ago, how did this turn out?

  • @kolos4650
    @kolos4650 6 лет назад +67

    Dude, you are so creative in so many different fields of science. Freaking renaissance man

  • @iamjimgroth
    @iamjimgroth 6 лет назад +117

    Oh FFS! I do *not* need another expensive hobby! But how can one not fall in love with this stuff?

  • @userequaltoNull
    @userequaltoNull 6 лет назад +91

    I love that this is meant to be easily understandable. I have looked for videos on the basics of Biotech for a while, and it seems that you have taken on that mantle for all of us. Thank you.
    Edit: Have you considered a video on preventing Contamination? Thanks.

    • @sementhrower420
      @sementhrower420 6 лет назад +3

      Yes. Contamination-prevention would be a fantastic piece to do!

  • @eyesmo
    @eyesmo 6 лет назад +30

    Excellent video! Minor history-of-science quibble: Taq was isolated from a bug (Thermus aquaticus) in Yellowstone hot springs, while Pfu polymerase was later isolated from a deep-sea hydrothermal vent bug (Pyrococcus furiosus).

  • @rishabh_7k
    @rishabh_7k 6 лет назад +2

    This world needs more people like you... love what you are doing.

  • @JeanRomainRoy
    @JeanRomainRoy 6 лет назад +105

    My simple engineer brain finally understood PCR, thank you for this explanation.

    • @ege8240
      @ege8240 Год назад

      i am a biomedical engineer, not math smart to be engineer not biology smart to be biologist, just qualified enough to work at mcdonalds :D

  • @MD-bf2ce
    @MD-bf2ce Год назад

    I recently decided to change my major from nursing to molecular biology and biotech research. I've always had these videos in my pocket, to watch when I'm interested. Now.. I'm super thankful for these videos. So educational, love it.

  • @caffeinatedspider3224
    @caffeinatedspider3224 6 лет назад +153

    So, "polymerase chain reaction machine" sounds cool and all, but who can we talk to about getting it renamed to "gene forge"?

    • @tainicon4639
      @tainicon4639 6 лет назад +10

      Caffeinated Spider I think it would be better to use that name for a DNA synthesis machine. But the name is awesome haha

    • @markarca6360
      @markarca6360 4 года назад +2

      That is called a thermal cycler.

    • @tampafreedom2237
      @tampafreedom2237 4 года назад

      Gene forge? Who’s gene?

    • @pbjracing14yearsago49
      @pbjracing14yearsago49 4 года назад +1

      @@tampafreedom2237 Gene lives a few blocks down my street and has a pet iguana named Steve. He also grows watermelons in his front yard. You should visit him sometime, chill guy.

    • @TheFrozenfish
      @TheFrozenfish 3 года назад +2

      There's an old (originally Mac) game series called "Geneforge" - and you cannot make this up - produced by Spiderweb Software :D

  • @joshthompson7101
    @joshthompson7101 4 года назад +2

    I've been looking for the answer on how each strand is the same length, even though extension doesn't have a stopping point beyond just cooling it down. This video gave me the answer. Thank you.

  • @StatisticalError82
    @StatisticalError82 6 лет назад +13

    I'm subscribed to a lot of channels, but no channel gets me as excited as this one when I get a video notification. Unless I'm driving, I drop everything to watch new uploads. Keep up the good work!
    Btw, what applications do you use the DIY heat block for instead of the PCR machine? On the surface, the PCR machine seems like a better and more controllable heat block, but I'm probably missing something

    • @thethoughtemporium
      @thethoughtemporium  6 лет назад +3

      Glad you enjoy. The main reason is that the heat block fits bigger tubes for bigger reactions

    • @StatisticalError82
      @StatisticalError82 6 лет назад +1

      @@thethoughtemporium ah, I see. What kind of bigger reactions are you going to be doing? More or less the same ones as the PCR machine?

    • @thethoughtemporium
      @thethoughtemporium  6 лет назад +4

      Transformations (putting DNA into organsims), Protease digestion, gibson assembly, restriction digests, etc etc

  • @Zahlenteufel1
    @Zahlenteufel1 6 лет назад +13

    As somebody with a really messed up biology education (6 teachers in 5 years of which 2 were first-time and 1 not technically a teacher, also only until 10th grade) I really want to thank you for how understandable this video is. I was able to watch it and understand everything in one go! To be fair, I am a nerd but still: Very nice video!

  • @AutumnPuffin
    @AutumnPuffin 6 лет назад +2

    You deserve far more exposure than you already get, people can really get a better understanding of Biotech from your videos, keep it up man!

    • @thethoughtemporium
      @thethoughtemporium  6 лет назад

      Best way to do that is to share the videos and support the channel so I can keep making these videos. Glad you enjoyed!

  • @Javi360flip
    @Javi360flip 4 года назад +1

    Aaaaand now everyone knows about it because of Corona. You really went ahead 1 year with this video :)

  • @sanampudasaini3379
    @sanampudasaini3379 4 года назад

    One of the best explanation in the web... Thanks

  • @wrenbird8352
    @wrenbird8352 6 лет назад +1

    I love this video because it shows practical uses for what a majority of my BIO 101 class taught me keep making your videos they are so cool.

  • @beliasphyre3497
    @beliasphyre3497 6 лет назад +44

    I actually understood most of that.

    • @darealpoopster
      @darealpoopster 6 лет назад +2

      Belias Phyre A high schooler could understand it. Freshmen in my school take slightly more advanced biology though it’s not nearly as interesting or fun

    • @beliasphyre3497
      @beliasphyre3497 6 лет назад +9

      Yeah... not so sure about that. At least measuring by the quality of students I see coming out of my local high school. They are barely literate, and some of them aren't even that. But those ones _cans play football good._

  • @hillarymorin2550
    @hillarymorin2550 4 года назад

    I have been struggling to understand primer design and PCR and this finally solidified it for me!!! THANK YOU!

  • @Alexander_Sannikov
    @Alexander_Sannikov 6 лет назад +1

    I actually do feel like i learned something from this youtube video, that explanation how to cut specific parts from dna makes perfect sense.

  • @marcocaliari2030
    @marcocaliari2030 6 лет назад +2

    A little note: Thermus Aquaticus (the taq polymerase synthetizing bacteria) was found in Yellowstone park, not in hydrotermal vents!

  • @franglish9265
    @franglish9265 6 лет назад +38

    Yay! PCR!!!!!
    So, how long until you are able to craft multiple copies of the pBlackwidowSpiderSilk?

    • @thethoughtemporium
      @thethoughtemporium  6 лет назад +9

      If we're lucky, end of november. If not, december.

    • @franglish9265
      @franglish9265 6 лет назад +1

      @@thethoughtemporium that's good I suppose. Definitely better than just water

    • @YousifSlaiwa
      @YousifSlaiwa 6 лет назад +1

      Do a tutorial on Golden Gate Assembly

  • @labronewalker7523
    @labronewalker7523 5 лет назад +1

    Thank you so much for that codon segment it helped me understand that a lot I was watching MIT lectures and was lost

  • @SixTough
    @SixTough 6 лет назад +2

    Nice graphics!
    Also, great vidjayo, I really liked the quick pace of it

  • @Kirumi_kanda_Cholan
    @Kirumi_kanda_Cholan 3 года назад

    Thank you so much!!!!! You have no idea how many minds youre inspiring and helping to learn with molecular techniques. Right from school kids to graduate students are benefitting from this. Thank you again, and I look forward for more molecular biology and bioengineering contents. I would also be happy to collaborate with you if you like.

  • @Azavelika
    @Azavelika 6 лет назад +2

    I'm really enjoying your videos. I hope I can give this a try one day. You're the most in-depth and accurate person I've seen in a long time. I always love seeing people help others and I get to learn some fun stuff while I'm at it. Good work.

  • @versag3776
    @versag3776 5 лет назад

    I know this is late but I absolutely love how informative your videos are. I started watching this thinking I would be completely lost and lose interest. But i am glad I watched it bc I was very wrong, I always learn a lot from your channel. Thank you!
    I want to get to know more of this so that I can make a lab to genetically test myself for my diagnosis of crohns possibly cure it. I also want to be able to test friends and family for diseases.

  • @nerdy7105
    @nerdy7105 5 лет назад

    i realy had lost the spirit to continue my studies but man this video is inspirational thx a lot keep up the good work

  • @furkanbork8986
    @furkanbork8986 6 лет назад

    I love your channel guys when I see a new video always think it's worth to watch it or otherwise they don't post it

  • @dirkrol3471
    @dirkrol3471 6 лет назад +6

    Thanks for all your awesome content related to biology, definitely learning more things than from a common class

  • @tesseract342
    @tesseract342 6 лет назад +7

    hey man, been waiting impatiently for your video.

  • @athenajmd
    @athenajmd 5 лет назад

    Thanks for making this! It’s awesome seeing a intro level video that actually walks you through a complete experiment workflow.
    My only complaint is that you talk so fast it is sometimes hard too keep up or take notes. I’ve used pause extensively, but a slightly slower pace verbally would be great.
    Can’t wait to see more of your genetics videos!

  • @surplusdriller1
    @surplusdriller1 6 лет назад +1

    Exelent video series. keep up the good work.

  • @DingDongDaily
    @DingDongDaily 6 лет назад +2

    i got a D in honors biology in highschool but this is so interesting. Thank you for this awesome content.

  • @dostler001
    @dostler001 6 лет назад

    Biology has always seemed like a dark art to me. You're videos make it much more approachable. I'm excited to see where this spider silk thread goes!

  • @africanelectron751
    @africanelectron751 6 лет назад

    Good lord this is fascinating!....I can't believe it's possible to explain this online.

  • @cphVlwYa
    @cphVlwYa 6 лет назад

    One thing you didn't touch on is that you can also extend your primer past the region you want it to bind to so that it will add that sequence to the end of your amplicon. This is extremely useful if you want to transcribe a region of DNA as you can amend your transcription promoter up stream of it.

    • @thethoughtemporium
      @thethoughtemporium  6 лет назад +1

      I did actually briefly. There was a shot of exactly that. That'll be covered in the Gibson assembly video though as it's beyond what I could cover in one video

  • @SmashedHatProject
    @SmashedHatProject 6 лет назад

    This is bending my brain. I am taking the shallow taxonomy/data/system analysis skill-set in life and this is getting pretty deep into bio-engibeering.

  • @nurdpage5366
    @nurdpage5366 6 лет назад

    I had been waiting for this. Thanks

  • @OwO-mx8uv
    @OwO-mx8uv 3 года назад

    I like to think G and C as Gucci and A and T as at&t. Helps me remember which goes to which.

  • @Sazoji
    @Sazoji 6 лет назад +8

    I am a biotech intern, took micro, genetics, biotech 1 and 2 (certification program stuff, essentially did what TTE has been doing with some genome annotation) and cell cultures. being unpaid and only having an AS, what jobs (other than a part-time student assistant) could I qualify to continue gaining experience in the field until next fall? I'm looking for ideas, but if anything I could just be an intern again at utsoutwestern.
    tl;dr I just want to know some other entry-level biotech jobs with some experience required

    • @WilliamDye-willdye
      @WilliamDye-willdye 6 лет назад +4

      I work for a company that makes a small (8-well) DNA testing machine. I have no idea if they would consider hiring an intern, but it shouldn't hurt to occasionally check their website for new job listings. The company name is MatMaCorp.

    • @Sazoji
      @Sazoji 6 лет назад +2

      @@WilliamDye-willdye thanks for the info! I searched them up and found their website, searching also had results for biotech-careers*dot*org and I found some local companies that make some interesting antibody kits. I wish the intern search functionality worked better on the site, but it has found a few great locations for a list.
      thanks for the help!

  • @NoProSkills
    @NoProSkills 6 лет назад

    Literally just finished the biotech unit in biology had to do about 30 pgs of work in a night but now I understand this vid.

  • @bananaramajam3583
    @bananaramajam3583 5 лет назад

    Great video, very helpful! My pedantic invertebrate biologist self compels me to point out that spiders aren't insects, though...

  • @rodrigooliveira885
    @rodrigooliveira885 4 года назад

    Dude I just need to tell you that you explain PCR much better than my goddamn teacher, like seriously, I was freaking out cause I didn't fully understand the process but you explained it really well

  • @StarrshProductions
    @StarrshProductions 5 лет назад

    Throwback to my biotech studies (psychologist now)...this is a project I wish I could have done in uni.

  • @edgeeffect
    @edgeeffect 6 лет назад +1

    Great video... I dropped out of biology and got into electronics and computing instead... It's funny to see that if I'd carried on with one I'd have been doing similar work to the other. :)

  • @filigenzilab9613
    @filigenzilab9613 4 года назад +1

    I don't mean to be rude, but how is the research on this topic going so far? I am excited to hear more about it :)

  • @VisionT100
    @VisionT100 5 лет назад

    what happened to the spider silk project? was it put on hold/canceled, or are you still trying to find fresher spiders? I love this project and really wanna see you actually have an end product.

  • @dr.pallavirai66
    @dr.pallavirai66 5 лет назад

    Can u pls provide a guide on how to perform a viral growth curve?

  • @michasz4297
    @michasz4297 6 лет назад +1

    *You should really make a video about how to synthesis recombinant HGH*

  • @panvart
    @panvart 6 лет назад

    Ha alpha DNA! You’re in Montréal? Just FYI, their primers work fine for basic PCR but we had issues with them for other things such as sequencing. I suspect they skimp on purification steps to offer lower prices. Nice video!

  • @OliverRGarcia
    @OliverRGarcia 6 лет назад

    This is great !
    Keep doing this videos ...

  • @jadirneto2130
    @jadirneto2130 6 лет назад

    Amazing how you learned everything by yourself nice job

  • @superirishm4n
    @superirishm4n 5 лет назад

    Hey Justin!
    Where did u get those forceps? I'm just starting my Ph.D. in molecular work and I want to be the cool guy in the lab with some fancy forceps! Thanks and keep making videos they are inspiring and incredible educational

    • @thethoughtemporium
      @thethoughtemporium  5 лет назад

      ebay. just look for titanium forceps, they're like 15 bucks

  • @kyatto7708
    @kyatto7708 5 лет назад +1

    Give the next video asap im addicted :)

  • @anthonyrickardii6198
    @anthonyrickardii6198 4 года назад

    Love your videos very interesting and educational I have a dumb question is there a way or can make a video how to make homemade buffers from scratch or is it possible. Thank you

  • @adityamor627
    @adityamor627 5 лет назад

    Wonderful series!!!

  • @carlablot5320
    @carlablot5320 4 года назад

    Nice video guys, it was very helpful for my project. But I couldn’t find the next video about building the empty plasmid. Someone can help me please ?

  • @VViproz
    @VViproz 6 лет назад +3

    Very interesting video thank you.
    I'm curious tho, what's the price of the primers you bought ?

    • @thethoughtemporium
      @thethoughtemporium  6 лет назад +5

      About 40-50 bucks for the whole set. That's the extra nice part about alpha DNA. They're super cheap. Sigma charges twice that.

  • @jody5661
    @jody5661 6 лет назад

    Do you have the soul eater logo in your web browser? (Top left at 6:06 for example)

  • @aidennymes6335
    @aidennymes6335 Год назад

    finally i have a basic understanding on how this all works. thanks, now I want more !

  • @Felixkeeg
    @Felixkeeg 6 лет назад

    This was recommended for me. You'll have 250k views on this in a week

  • @weldmaster80
    @weldmaster80 6 лет назад

    And..... I'm picking up my first PCR machine today!

  • @MrPinknumber
    @MrPinknumber 6 лет назад +1

    so good !

  • @masudhassan3363
    @masudhassan3363 6 лет назад

    I have this as test tomorrow. What are the odds!!

  • @XxPlayMakerxX131
    @XxPlayMakerxX131 6 лет назад

    Finally The wait is over!

    • @thethoughtemporium
      @thethoughtemporium  6 лет назад

      Ya the edit on this one took a long time. Started on Wednesday and finished this morning. I'm exhausted, but I think it was worth it

    • @XxPlayMakerxX131
      @XxPlayMakerxX131 6 лет назад

      The Thought Emporium
      Thank you

  • @Mycobob
    @Mycobob 6 лет назад

    Cool stuff man

  • @Biologyandbiotechnology-qc5jo
    @Biologyandbiotechnology-qc5jo 4 месяца назад

    nice presentation

  • @markarca6360
    @markarca6360 4 года назад

    This test is used as a diagnostic tool to detect emerging viral diseases. It is so sensitive that it can detect nucleic acid from dead virions.

  • @atomipi
    @atomipi 5 лет назад

    fascinating.. reminds me of Gattaca :)

  • @user-ij9xi5ey9j
    @user-ij9xi5ey9j 4 года назад

    is there a specific place you buy buffers or any kits you could recommend

  • @jodag966
    @jodag966 5 лет назад

    question. if you have your gene sequence yo only need to ad the start aminoacid and the stop aminoacid to the sequence if the sequence doesnt have it and know what polymerase you are going to use

  • @lop2167
    @lop2167 5 лет назад

    Could you use CRISPR for this?

  • @figarybka1393
    @figarybka1393 6 лет назад

    How about creating your own IC... How hard would it be, creating integrated circuit outside of the industry?

    • @edgeeffect
      @edgeeffect 6 лет назад +2

      ruclips.net/video/23fTB3hG5cA/видео.html

  • @Jimunu
    @Jimunu 6 лет назад

    This is beautiful

  • @JustinKoenigSilica
    @JustinKoenigSilica 6 лет назад

    Do you need to add ATP to the solution so the DNAPolymerase can copy dna?

  • @wayne02058
    @wayne02058 4 года назад

    What is a primer dimer ?

  • @annoorkhan4219
    @annoorkhan4219 9 месяцев назад

    Cool, I have experience with image processing. Could you please help me design a PCR machine?

  •  5 лет назад

    Hi! I am not sure about what if I have my forward primer bonded to the intron side and 2 bp from the start of my exon (coding region) bonded in to the end of my fwd primer. So my question is when I start reading the codons from my exon, I start it including those base pairs included to my forward primer, or I start reading them after the primer?

  • @feelx92ger
    @feelx92ger 6 лет назад

    Any info you are willing to share about your progress on GOES 17? Is it online yet?

    • @thethoughtemporium
      @thethoughtemporium  6 лет назад

      It started snowing. Hard to be outside in a blizzard. So yes it's online, no I can't do anything about it unfortunately

  • @DesignedinAustralia0
    @DesignedinAustralia0 6 лет назад

    Out of the topic and all other stuff that i like to watch in your channel(and lack understanding and feel like an ape in space programme :P ), i have a GREAT Question with a HUGE Problem around the world which nails thousands of people ; `Mouldy` books. Apart from controlling moisture, apart from people stating `You know, i placed it in sunlight and all the mould is gone`, i've been yet so far trying to find a method which can `turn` old zombiefied stinky books back to live. So far, except so many of the useless ideas and rubbish spread over the net, few things i have found BACKED by academic research and paperwork; 1- Freezing to -86 Degrees (Which kills all the mould which made me win a jackpot and buy an ultra low freezer but didn't have guts to operate it yet) 2- Vacuum of Space 3- Freeze Drying and 4- Chemical Fumigation&Playing around with Toxic stuff (which is out of my reach due to dangers involved). I will chuck them to ultra low freezer (and then place them into vacuum chamber) but before i go-full-mad on all the mouldy books i have(which a library full of due to a disaster) i just want to know if you have any experiences or data you may share? Mould in books is a huge issue and not much amount of attention is given these days it seems. I've managed to find an old timer who was in the business for very long time but he was scared to chat about his techniques(thinking i might steal his job maybe) but he said he uses `vacuum of space` kinda method with other combined.I just want my 100+books back without mould and paperback until decent book scanners get a good price(or i got to DIY one!) Supporting the channel with 5 subs(shhh it is secret) with all the house equipment since you had 10k subs and great work and keep em coming!

  • @hopefulfailure7175
    @hopefulfailure7175 5 лет назад

    My dude you should totally stream your work on twitch for educational and financial awesomeness :p
    I would be fascinated to see this live... o.o

  • @JC-11111
    @JC-11111 3 года назад

    Is this how forensic biology labs work when needing to test DNA but there's not a large enough sample? They take that tiny bit of genetic material that was recovered from a crime scene, take out the DNA, using yeast they get it to start multiplying until there's enough to test, then test it?
    Or something like that?

  • @fips001
    @fips001 6 лет назад

    did you try benchling?

  • @markdavis5176
    @markdavis5176 5 месяцев назад

    I've been trying to buy primers for a side project, but i am not associated to a lab and would like to have them delivered to my home lab. I'm wondering if you know of a company that will send me primers to a residential address? Do you have any tips?

  • @alexk.7064
    @alexk.7064 5 лет назад

    Did you use a positive and negative control? :P

  • @cjd1850
    @cjd1850 4 года назад

    After my last semester of phage gene research, I couldn’t agree with this title more. XD

  • @philanthropicnightmare1206
    @philanthropicnightmare1206 3 года назад

    What do you use now that Genome Compiler is gone?

    • @thethoughtemporium
      @thethoughtemporium  3 года назад +1

      benchling

    • @philanthropicnightmare1206
      @philanthropicnightmare1206 3 года назад

      @@thethoughtemporium Oh sick! That's what I got an account on. I'm brand new to this and know pretty much nothing about gene editing, but I'm watching your past Who's Gene is it Anyway streams. Do you plan to do another one of those soon?

  • @phlimy
    @phlimy 6 лет назад

    This is so cool

  • @CharJlJly
    @CharJlJly 5 лет назад

    Didn't understand anything. But very interesting....

  • @hananehshikhhasani2091
    @hananehshikhhasani2091 Год назад

    I think the speaker is talking too fast. This is a practical matter, so a little slower is better.

  • @jskratnyarlathotep8411
    @jskratnyarlathotep8411 4 года назад

    love this vid

  • @oskar8536
    @oskar8536 6 лет назад

    This has probably already been answered somewhere that I haven’t found, but what does the ”kb” stand for? My programming brain sees “kilobits” but I doubt that’s correct...

    • @thethoughtemporium
      @thethoughtemporium  6 лет назад +1

      "kilo-base pairs". It's counting the number of individual letters. So similar to kilobits, but much more squishy.

    • @oskar8536
      @oskar8536 6 лет назад

      @@thethoughtemporium Ooh, that makes much more sense! Thank you, and keep up the good work!

  • @DerSolinski
    @DerSolinski 6 лет назад

    Hm could you teach yeast to produce methane from CO₂ and H₂O?

  • @brycemccarthick4396
    @brycemccarthick4396 5 лет назад

    How could you use a dna data base wouldn’t every spider have different combinations of letters

  • @visionlucky6819
    @visionlucky6819 6 лет назад

    anyone know what his thermal cycler is i’m looking to start my own lab

  • @landlockedviking
    @landlockedviking 5 лет назад

    Thankyou!

  • @hikiwi
    @hikiwi 6 лет назад

    Amazing once again

  • @diablominero
    @diablominero 6 лет назад

    Wait, why are you using an insect-specific protocol on spiders? Are they similar enough that it'll work?

  • @faizaarshad705
    @faizaarshad705 4 года назад

    1x to 5x? What do you mean

  • @bcikablam3578
    @bcikablam3578 6 лет назад

    🤯 my mind is a little bit blown