UniProt | Universal Protein Data Bank | Lecture 8 by Dr. Muhammad Naveed
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- Опубликовано: 22 авг 2024
- Complete detailed lecture on Uniprot Universal Protein Data Bank
UniProt is a freely accessible database of protein sequence and functional information, many entries being derived from genome sequencing projects. It contains a large amount of information about the biological function of proteins derived from the research literature.
#Uniprot #pdb #proteinStructure
Alhumdulilla. it's so Informative..
well-wisher from Bangladesh
Welcome and pleasures dear
Good method of teaching.. Always informative videos and keep it up.
Welcome and sure
@@Prof.Dr.MuhammadNaveed sir ap Entrez py b video bnaye plzz
@@komalanaya941 Noted and in queue. Will make soon
@@Prof.Dr.MuhammadNaveed thnkew sir g.
i am much confused about it.
Plzz make video lecture as soos as possible.
@@komalanaya941 sure
Keep it up dear sir👍
Masha Allah
welcome
❤️❤️❤️Easy way to learn 😊
yup
Your lecture is best lecture in youtube
Glads its helps you
very good sir hamesha hush raho
ameen pleasures dear
It is helpful for me as well as for my students
welcome
It helped me alot to use uniprot.. sir could you make a video on pymol as well?
sure noted
Love and respect from University of Peshawar.
welcome dear
please sir make video about the purpose of psi blast and how to use it , and when we should use it?
Hlo Sir....Too informative tutorial but I have a question regarding proteins almost all proteins have missing residues in it, in its .pdb format both on pdb and uniprot how we can fill these residues because while doing md these residues make some trouble.....Thanks
U said structure ka pta lga sktay by using uniprot then I have 2 questions how do we know by using uniprot that protein has 3d model available or not I mean if we want to make a 3D MODEL then how will we know k 3d model already bna hua hai ya nahi ? And what does reviewed and unreviewed mean in status entry in uniprot?
just write the name of your protein on UniProt if not find results then means not available and then need to construct structure from I-TASSER or Modeller
Love you sir
Stay happy
Nice❤️..
Lots of love from KASHMIR ❤️
Pleasures and stay blessed dear
Sir...if you have any study material of M.sc biotecnology , can you share that with me.?
Assalam o Alaikum sir.. kindly tell me about data bases that is used to find out the genetic hereditary disorders.. and its importance. Kindly guide me sir
first of all, use NCBI with reference to all inheritance related gene on GenBank and Blast to compare them
@@Prof.Dr.MuhammadNaveed thank you sir
❤
Thank you very much sir.
Sir i have a question, kisi bhi gene ka....like maltase gene hai hamare pass...to sir uske active site pr gonserved domail ke bare me kese dekhenge....plz guide ??
watch lecture on I-TASSER then for conserved domain interproscan
@@Prof.Dr.MuhammadNaveed how can we find active site of enzymes by the help of sequences. And then how can we find the conserved domain.?? Plzz guide
aik aur baar sir uni k teachers recommend kr rhy hen ky ensemble use kryn. Sir have you made any video on ensemble?
It is all good and will made video on it in near future
very informative sir. I can't visualize 3d structure on uniprot and pdb. For this what should i have to do?install software?kindly guide me sir.thanks
You need to install discovery studio or PyMol or Jmol on your computer then you can visualise 3D structures
@@Prof.Dr.MuhammadNaveed bundle of thanks sir
Sir jis protein ka fasta sequence lea us protein ki PDB id kdr hai..mtlb kya hm uniprot sa protein ka 3D structure b la skty hain...
yes
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aoa sir! your teaching method is so good but i want to know that how can i the percent identity of
FMR1 between human and Pan paniscus?
do clustal w
Sir how we can prepare a programme to identify non coding sequences
Sir what is the difference between swissprot and uniprot
nothing just data sources
sir what is the difference between swiss prot and uniprot
both same just little difference in data
Sir How can I get mutation data from uniprot?
Here you can get protein primary sequence and rest do on blastx
Sir
How can I interpret from this protien detail in my thesis?
you may add your protein all information from this database as protein Macro and Micro molecules and functional properties
For single standard DNA please help us
Sir, any lectures on PTM and process to rule out them?
will share soon
AoA Sir Sir apni protein k sequence pa kaise apply ker la
waslam ??? if you want to ask how to submit your protein at UniProt then follow submission process but before do characterize your protein at in vitro level
very simple and very informative
Pleasures
Sir, i want to know that how can I be an expert in bioinformatics??
It might be very early to say but it's my gut feeling..
@@tahiraghulam2733 do watch my all lectures from Lec 1 to Lec 11 and where got problem write comment under that video ok
Noted with thanks 😊
Sir can u pls tell the ifference between NCBI BLAST and UniProt BLAST?
just change the name of database and recommend you NCBI for Blast
Sir how to get proteom data of any organisms , please tell 🙏
look in protein section of uniprot
@@Prof.Dr.MuhammadNaveed sir how to use Database of Essential gene (DEG) please tell
How i can create libary
From NCBI Genbank
Watch lecture 1 and 2