Видео

Lucrezia Catapano has made a graphics tutorials for Coot 1 covering map masking, Shader Preferences and scripting. Part 2 Scripts for this tutorial: pemsley.github.io/coot/blog/2022/09/13/coot-1-graphics-tutorial.html

Lucrezia Catapano has made a graphics tutorials for Coot 1 covering map masking, Shader Preferences and scripting. Part 1 Scripts for this tutorial: pemsley.github.io/coot/blog/2022/09/13/coot-1-graphics-tutorial.html

Using Coot 1 starting from scratch. Video by Lucrezia Catapano (@lulu_catapano on Twitter) Coot 1 binaries (RUclips adds redirections for URLS): Linux: devtools.fg.oisin.rc-harwell.ac.uk/downloads/index.php Mac OS: # install homebrew /bin/bash -c "$(curl -fsSL raw.githubusercontent.com/Homebrew/install/HEAD/install.sh) # install coot brew install wget wget raw.githubusercontent.com/YoshitakaMo/...

How does Gtk4 compare against Gtk3 on Mac OS for OpenGL? I don't know what the capture rate of QuickTime Player is, but it seems that it doesn't capture the full smoothness of the GTK4 version.

Using reorienting-next-residue mode

Using Geman-McClure restraints with Coot on a chain

Moving beyond the introduction tutorial, there are faster ways of using Coot (dragging on atoms is usually not needed). These faster ways however, do take some time to learn.

Working through the x-ray tutorial with key-bindings, an updated interface and CURLEW tools.

3:08 That should be Calculate → Modelling → Residues with Missing Atoms → OK (the glitches makes that unclear)

The first part of the first Coot tutorial (part 1 of 2) (video has capture glitches (sigh))

A wordless example of the new style of Real Space Refinement in Coot

Base pair and stacking conformations can be maintained by use of ProSMART-like local distance restraints. Presented by Ana Casañal

Video showing Coot running Cootilus - the nucleic acid builder inside Coot. Made by Kevin Cowtan