wildvineyard
wildvineyard
  • Видео 118
  • Просмотров 129 110

Видео

The first coding/programming video you should ever watch
Просмотров 101Год назад
Dr. Lisa explains the essence of coding. Not how to code, but how to THINK about it. @wildvineyard
Welcome to Environmental Science Analysis 2023
Просмотров 134Год назад
Dr. Lisa welcomes you to the class and provides important info!
Welcome to Environmental Organic Chemistry Sping 2023
Просмотров 2262 года назад
Dr. Lisa welcomes you to class and explains some of the ground rules.
Multiple ways to load your data into R
Просмотров 1422 года назад
Dr. Lisa shows you several ways to load data into R from csv and Excel files, using lines of code, the "import datasets" dialog, and even file.choose.
Dr. Lisa explains how to do stepwise regression in a loop in R
Просмотров 6602 года назад
Dr. Lisa explains how to do stepwise regression on many columns of data using a loop, and how to export the results in a usable format in R
Welcome to Env Science Analysis Fall 2022
Просмотров 1802 года назад
Dr. Lisa welcomes you to her fall class.
Dr. Lisa explains hydrolysis homework
Просмотров 2602 года назад
Dr. Lisa calculates the rate of hydrolysis of a chemical in the epilimnion and hypolimnion of a lake (different temperatures and pH).
Calculating partitioning of a chemical between water, DOC and POC (HW7)
Просмотров 5522 года назад
Dr. Lisa calculates the partitioning of a chemical between the dissolved phase, the particulate organic carbon (POC) and the dissolved organic carbon (DOC) in order to understand how fast it settles in the water column (homework problem #7)
Dr. Lisa explains the 2022 midterm exam
Просмотров 1422 года назад
Dr. Lisa helps you understand what she was asking for in the midterm so that you can redo it and raise your grade.
Practice problem: calculating the change in solubility across the melting point
Просмотров 1492 года назад
How to calculate the change in aqueous solubility of an organic chemical when the change in temperature crosses the melting point.
How to use the UFZ-LSER online tool to find physical and chemical properties of organic compounds
Просмотров 2342 года назад
How to use the UFZ-LSER online tool to find physical and chemical properties of organic compounds
Welcome to Env Orgo 2022!
Просмотров 1053 года назад
Dr. Lisa explains the ground rules for her Spring 2022 Environmental Organic Chemistry class.
Welcome to 501 for Fall 2021
Просмотров 2673 года назад
Dr. Lisa says hi and explains the structure of the class for fall 2021
SETAC Europe 2021 Source Apportionment of PFAS in Great Lakes Fish
Просмотров 7733 года назад
Dr. Lisa Rodenburg presents our work on using PMF to investigate the sources of Perfluoro Alkyl Substances to Great Lakes fish.
Problem 13-8 Hydrolysis of disulfoton
Просмотров 1773 года назад
Problem 13-8 Hydrolysis of disulfoton
Positive Matrix Factorization for dummies (better audio)
Просмотров 3,7 тыс.3 года назад
Positive Matrix Factorization for dummies (better audio)
Case studies: using the one-box model to predict the fate of chemicals in the environment
Просмотров 4353 года назад
Case studies: using the one-box model to predict the fate of chemicals in the environment
Practice problem: settling of contaminants with particles
Просмотров 4393 года назад
Practice problem: settling of contaminants with particles
Sorption: relationships between Koc and Kow, and the solids concentration effect
Просмотров 1,5 тыс.3 года назад
Sorption: relationships between Koc and Kow, and the solids concentration effect
What is natural organic matter?
Просмотров 5513 года назад
What is natural organic matter?
Sorption 4: Koc, the organic carbon-water partition coefficient
Просмотров 2,6 тыс.3 года назад
Sorption 4: Koc, the organic carbon-water partition coefficient
Sorption 3: How to calculate fraction sorbed (or not sorbed)
Просмотров 8593 года назад
Sorption 3: How to calculate fraction sorbed (or not sorbed)
Sorption 2: Types of isotherms
Просмотров 2,6 тыс.3 года назад
Sorption 2: Types of isotherms
Sorption 1 Intro
Просмотров 1,1 тыс.3 года назад
Sorption 1 Intro
Practice problem: Three phase partitioning in a wastewater treatment plant
Просмотров 3513 года назад
Practice problem: Three phase partitioning in a wastewater treatment plant
Quiz 1 answers
Просмотров 1863 года назад
Quiz 1 answers
Homework 3: solubility
Просмотров 2894 года назад
Homework 3: solubility
Homework 2: vapor pressure
Просмотров 2914 года назад
Homework 2: vapor pressure
Reductive dehalogenation of pollutants in the environment
Просмотров 5154 года назад
Reductive dehalogenation of pollutants in the environment

Комментарии

  • @TronicsInTen
    @TronicsInTen 2 дня назад

    Thank you for sharing this - you helped me save time in creating a similar heatmap map for radio transmitter measurements :)

  • @latmukd
    @latmukd 27 дней назад

    Thank you so much Prof. This is really helpful.

  • @AmmaraGcuf
    @AmmaraGcuf 2 месяца назад

    How do you create uncertainty files

  • @sivaranjan7945
    @sivaranjan7945 3 месяца назад

    Thank you mam..its really helpful

  • @zahidbashir8946
    @zahidbashir8946 3 месяца назад

    Why doesnt this show DISP results

  • @waqarazeemjadoon
    @waqarazeemjadoon 4 месяца назад

    Dr. LISA, Thank you for such a wonderful and informative video. Are you still working with PMF? I just started using it and go through various problems and want to ask to you time by time. Is it possible to do so?

  • @brockkeller6090
    @brockkeller6090 4 месяца назад

    omg this video has saved me thank you so much! I couldn't make any sense of my lecture slides and this is what finally cleared things up for me after many hopeless hours of trying to interpret everything.

  • @Discoworldbliss
    @Discoworldbliss 4 месяца назад

    please make a video purely for the PCA vs PMF,and their interpretation.urgently needed.You explain very clearly.Pls help if its possible.

  • @pitamberwagle7086
    @pitamberwagle7086 4 месяца назад

    How can I download all daily discharge from all gauge stations in a state in bulk?

  • @ravikumar-km9lg
    @ravikumar-km9lg 8 месяцев назад

    Where are you from ma'am?

  • @ravikumar-km9lg
    @ravikumar-km9lg 8 месяцев назад

    Nice class 😊👍

  • @mitchellsteindler
    @mitchellsteindler 8 месяцев назад

    This data is a mess 🥲

  • @NathanelAviges
    @NathanelAviges 10 месяцев назад

    @11:41 In the homework in canvas, there isn't a 1-alpha, just for anyone who is lost. It is just alpha for acids.

  • @MHBD-ds6ym
    @MHBD-ds6ym Год назад

    Thank you mam , for the advice.. I am from Bangladesh, an undergrad student.

  • @shuvashisshuvo1693
    @shuvashisshuvo1693 Год назад

    Hello, I am facing the following problem while using the EPA PMF 5.0. Unhandled exception has occurred in your application. If you click Continue, the application will ignore this error and attempt to continue. If you click Quit, the application will close immediately. Index was outside the bounds of the array. Can anyone help me to get rid of this?

  • @222lolololol
    @222lolololol Год назад

    Thank you very much Dr. Lisa. This video is wonderfull

  • @satyakibanerjee9329
    @satyakibanerjee9329 Год назад

    what should be considered as uncertainty????

  • @wildvineyard
    @wildvineyard Год назад

    HI all, I frequently get asked about how to construct your uncertainty matrix. Here is my advice: calculating uncertainty is tough. We use the RSD of surrogate recoveries, but if you don't have those, you can use the Relative Percent Difference of duplicates. Often the RPD ranges from tiny to >100%, so I usually scale it so that the uncertainties range from about 10% to about 35% but the ranking of the uncertainties among the analytes is the same. I have also used information on reproducibility that we got from the published method. If all else fails, you can punt and use a sliding scale, starting with 10% for the things that you feel in your gut are certain (probably including things that are well above the LOD) and use 35% for the less certain things (including stuff near the LOD). For example, I would give a high uncertainty to things like nitrite since it is so reactive and hard to measure, and low uncertainty to things like TOC, which is pretty easy to measure. Keep in mind that PMF 5.0 takes the uncertainty in the same units as the input concentrations, so you have to multiply these percentages by the measured concentration. And you always give a much higher unc to NDs. I usually use three times the regular uncertainty for that analyte and apply it to NDs (multiplied by whatever value I'm using as a proxy for the ND, usually half the LOD). You may have to try a few unc matrixes until you find one that works. And PMF 5.0 has that field under Base Model...Concentration/Uncertainty where you can add extra modeling uncertainty. Try it with 0% extra uncertainty and then keep increasing the extra uncertainty by 5% at a time until you get something that works.

  • @wildvineyard
    @wildvineyard Год назад

    HI all, I frequently get asked about how to construct your uncertainty matrix. Here is my advice: calculating uncertainty is tough. We use the RSD of surrogate recoveries, but if you don't have those, you can use the Relative Percent Difference of duplicates. Often the RPD ranges from tiny to >100%, so I usually scale it so that the uncertainties range from about 10% to about 35% but the ranking of the uncertainties among the analytes is the same. I have also used information on reproducibility that we got from the published method. If all else fails, you can punt and use a sliding scale, starting with 10% for the things that you feel in your gut are certain (probably including things that are well above the LOD) and use 35% for the less certain things (including stuff near the LOD). For example, I would give a high uncertainty to things like nitrite since it is so reactive and hard to measure, and low uncertainty to things like TOC, which is pretty easy to measure. Keep in mind that PMF 5.0 takes the uncertainty in the same units as the input concentrations, so you have to multiply these percentages by the measured concentration. And you always give a much higher unc to NDs. I usually use three times the regular uncertainty for that analyte and apply it to NDs (multiplied by whatever value I'm using as a proxy for the ND, usually half the LOD). You may have to try a few unc matrixes until you find one that works. And PMF 5.0 has that field under Base Model...Concentration/Uncertainty where you can add extra modeling uncertainty. Try it with 0% extra uncertainty and then keep increasing the extra uncertainty by 5% at a time until you get something that works.

  • @wildvineyard
    @wildvineyard Год назад

    HI all, I frequently get asked about how to construct your uncertainty matrix. Here is my advice: calculating uncertainty is tough. We use the RSD of surrogate recoveries, but if you don't have those, you can use the Relative Percent Difference of duplicates. Often the RPD ranges from tiny to >100%, so I usually scale it so that the uncertainties range from about 10% to about 35% but the ranking of the uncertainties among the analytes is the same. I have also used information on reproducibility that we got from the published method. If all else fails, you can punt and use a sliding scale, starting with 10% for the things that you feel in your gut are certain (probably including things that are well above the LOD) and use 35% for the less certain things (including stuff near the LOD). For example, I would give a high uncertainty to things like nitrite since it is so reactive and hard to measure, and low uncertainty to things like TOC, which is pretty easy to measure. Keep in mind that PMF 5.0 takes the uncertainty in the same units as the input concentrations, so you have to multiply these percentages by the measured concentration. And you always give a much higher unc to NDs. I usually use three times the regular uncertainty for that analyte and apply it to NDs (multiplied by whatever value I'm using as a proxy for the ND, usually half the LOD). You may have to try a few unc matrixes until you find one that works. And PMF 5.0 has that field under Base Model...Concentration/Uncertainty where you can add extra modeling uncertainty. Try it with 0% extra uncertainty and then keep increasing the extra uncertainty by 5% at a time until you get something that works.

    • @prasenjeetchakraborty
      @prasenjeetchakraborty Год назад

      Madam, your video is pretty much helpful for researchers like us. But I am still struggling with the uncertainty calculations. If you may attach any example file of excel sheet where we can see the calculations or observations, that would be very much helpful. I would be looking for your kind reply.

  • @wildvineyard
    @wildvineyard Год назад

    oops. 2 H2O => H3O+ + OH- Even profs make mistakes....

  • @philg4116
    @philg4116 Год назад

    Pentachloroethane destroys the testicles! DESTROYS THE TESTICLES!!!

  • @ayushitiwari6733
    @ayushitiwari6733 Год назад

    How do I get legend of these colors on Google Earth?

  • @bazelal-shaibah111
    @bazelal-shaibah111 Год назад

    Can you explain more by using other examples? it is not understandable!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!

  • @wasa5769
    @wasa5769 Год назад

    Thank you very much.

  • @madein-gf4yc
    @madein-gf4yc Год назад

    My Q values always 0,could somebody help me?

  • @latonianuradyanis58
    @latonianuradyanis58 Год назад

    Professor what is the difference between base model and bootstrap value in PMF ? Thankyou very much

    • @abu.selim26
      @abu.selim26 5 месяцев назад

      if PMF base model does not fit your data then that is optional

  • @C3PO_
    @C3PO_ Год назад

    Thank you so much for this concise explanation of PMF (as well as the touch on the other factor analysis methods). I wish you could cover the estimation of uncertainties of analyte measurements, if it's an essential input to PMF analysis - OK, I just saw your explanation of uncertainty estimation in the comments below...😅 THANK YOU!

  • @genedodd
    @genedodd 2 года назад

    I think if you right click on the PFAS fish ... you get some options, including REVERT, which allows you to redo the Wizard without importing again.

  • @asujan
    @asujan 2 года назад

    great thanks

  • @inspirationplug1779
    @inspirationplug1779 2 года назад

    This video just made my day..

  • @yousefalsufayan391
    @yousefalsufayan391 2 года назад

    great video, would love to see more PMF on PM 2.5

  • @takisally
    @takisally 2 года назад

    Why are you whispering

  • @littlejoetyme4589
    @littlejoetyme4589 2 года назад

    Please can I send my assignment to your mail so that you guide me through

  • @aminnaifar4442
    @aminnaifar4442 2 года назад

    thanks a lot Md could you give us more other videos ?

  • @wildvineyard
    @wildvineyard 2 года назад

    Yes! you can take my course as a self-guided tutorial. Email me at my first name dot last name at Rutgers.edu and I will send you the link.

  • @nicolas.leger3
    @nicolas.leger3 2 года назад

    Amazing !

  • @liorsinger1
    @liorsinger1 2 года назад

    Thank God for the pandemic that made you post these videos on RUclips! Thank you!

  • @liorsinger1
    @liorsinger1 2 года назад

    Your work is amazing! Your channel is amazing! I'm so glad I found it! It might keep me entertained the whole night :)

  • @seanpitcher8957
    @seanpitcher8957 2 года назад

    Is there a way to take your class under a non degree seeking student status?

  • @cyrilgiovannangeli2636
    @cyrilgiovannangeli2636 2 года назад

    Dear Doctor, Thank you very much for this video ! It's really interesting because I'm in the same case. Is it possible to have exchanges to resolve my problem ? Yours sincerely, GIOVANNANGELI Cyril

  • @seanpitcher8957
    @seanpitcher8957 2 года назад

    This is absolutely awesome. I'm doing (like right now) a monster MLR for a 'y' (client and everything confidential but I'll say it's a potable water contaminant of emerging concern ; ) ) at a sample point given 114 possible causation variables, so it is pretty serendipitous that I 'randomly' (I'm sure the good folks at Google know I'm in R and running MLRs, so maybe not so randomly) ran into this. I used a Pearson correlation matrix to pick likely explanatory variables and then just used R^2 and RSE for my goodness of fit. Some of the explanatory variables are correlated so I switched them back and forth to see which one gave me the best overall model and whether they are statistically significant. Then I peek at the residuals and leverage and fine tune. Learned two things today: I need to get more familiar with AIC & need to experiment with try().

  • @KS-nz8ij
    @KS-nz8ij 2 года назад

    Dr. Lisa, do you allow for someone outside of this class to follow along? Regardless, I appreciate all of the content of your Channel!

  • @BobBeatski71
    @BobBeatski71 2 года назад

    Mega thank you for sharing your R insights. This has really helped me create multiple histograms from a large array, all in one go. I'm using the techniques you demonstrate, here, with those from Joachim on visualisation. Link:- ruclips.net/video/y__hvGTN7ms/видео.html

  • @XBKLYN
    @XBKLYN 2 года назад

    This video is super helpful.....you saved me hours of spreadsheet manipulation. Thank you.

  • @lyesMCA
    @lyesMCA 2 года назад

    can you in video explain how to calculate specie specific uncertainty in PMF in detail. Thank you in advance.

  • @marksinasac7298
    @marksinasac7298 2 года назад

    By chance offer free lance work? I have some data I would like a regression analysis completed on, and then help create a prediction algorithm based on the freundlich equation.

  • @olivervaye6195
    @olivervaye6195 2 года назад

    Thank you!

  • @Kennywurb
    @Kennywurb 2 года назад

    Thanks a lot. I have one question about PMF. What does E (leftover or residual) values in the case of PFAS in lake fish mean? Does the E values mean we have some factors remained unidentified? Look forward to your reply. Thanks.

  • @nguyencuonqt
    @nguyencuonqt 2 года назад

    It is really helpful. Thank you Prof. Lisa