-------- BWA tool link
github.com/lh3/bwa
--------- BWA Script installation
alex@alex:~/Downloads/bwa-master$ make
--------- BWA Script for build index
alex@alex:~/Downloads/bwa-master$ ./bwa index ../Saccharomyces_cerevisiae.R64-1-1.dna.toplevel.fa
********* Run Alignment [*There is an angled bracket in this script which is missing, see the video ]
alex@alex:~/Downloads/bwa-master$ ./bwa mem ../Saccharomyces_cerevisiae.R64-1-1.dna.toplevel.fa ../Read1_forward.fastq ../Read1_reverse.fastq | gzip -3 * aligned.sam.gz
* RUclips does not allow writing angled brackets in the description box. So it is missing.
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----------- Quick note
01:23 Installation
03:...