Center for Physical Genomics and Engineering
Center for Physical Genomics and Engineering
  • Видео 34
  • Просмотров 8 275
Epigenomic Landscape of Retrotransposon Expression in Senescence and Neurodegeneration - John Sedivy
The genomes of virtually all organisms contain repetitive sequences that are generated by the activity of transposable elements (transposons). This relationship has been largely competitive, and transposons have earned epithets such as ‘junk DNA’ and ‘molecular parasites’. All organisms have evolved diverse mechanisms to repress the activity of their transposons. Recent evidence suggests that retrotransposable elements (retrotranposons) can become activated with age in somatic tissues of diverse species including yeast, Drosophila, and mammals. In particular, during cellular senescence of human cells, LINE-1 retrotransposons become transcriptionally derepressed and activate a type-I inter...
Просмотров: 42

Видео

The Center for Physical Genomics and Engineering at Northwestern University
Просмотров 181Месяц назад
Engineering living systems at the interface of biological, physical and computational sciences since 2019. CPGE conducts transdisciplinary research incorporating tools and techniques from diverse fields including super-resolution imaging, modeling, computational genomics and genome mapping, biology, chemistry and machine learning, and trains the next generation of scientific leaders. CPGE focus...
Many-to-Many Networks: Multifunctional Modules for Multicellularity - Michael Elowitz
Просмотров 881Месяц назад
In multicellular organisms, many biological pathways exhibit a curious structure, involving sets of protein variants that bind or interact with one another in a many-to-many fashion. What functions do these seemingly complicated architectures provide? And can similar architectures be useful in synthetic biology? Here, Dr. Elowitz discusses recent work in his lab that shows how many-to-many circ...
Mechanisms and Applications of DNA Methylation and Gene Silencing in Plants - Steve Jacobsen
Просмотров 1472 месяца назад
Prof. Steve Jacobsen, Professor of Molecular Cell & Development Biology, HHMI Investigator, University of California, Los Angeles DNA methylation is associated with transcriptional repression of eukaryotic genes and transposons. Plants have evolved elaborate systems for the establishment and maintenance of DNA methylation, involving a number of self-reinforcing loop systems that allow for the h...
Q&A: Afternoon Session, 2024 Symposium on Physical Genomics
Просмотров 1152 месяца назад
Profs. Haynes and Squires and PhD candidate Joseph Wakim answer audience questions at the 2024 Symposium on Physical Genomics at Northwestern University. Sponsored by the Center for Physical Genomics and Engineering at Northwestern University, the Cancer and Physical Sciences Program at the Robert H. Lurie Comprehensive Cancer Center, and NIH Grants T32GM142604 and U54CA268084 physicalgenomics....
Q&A: Morning Session, 2024 Symposium on Physical Genomics
Просмотров 82 месяца назад
Profs. Narita, Lakadamyali, and Huang answer audience questions at the 2024 Symposium on Physical Genomics at Northwestern University. Sponsored by the Center for Physical Genomics and Engineering at Northwestern University, the Cancer and Physical Sciences Program at the Robert H. Lurie Comprehensive Cancer Center, and NIH Grants T32GM142604 and U54CA268084 physicalgenomics.northwestern.edu
Capturing Biomolecular Interactions at Single-Molecule Level via ABEL Trap Fluorescence Spectroscopy
Просмотров 812 месяца назад
Dr. Allison Squires of the University of Chicago presents an invited talk at the 2024 Symposium on Physical Genomics at Northwestern University. Prof. Allison Squires is the Neubauer Family Assistant Professor of Molecular Engineering in the Pritzker School of Molecular Engineering. The Squires Group’s interdisciplinary research centers on sensing, imaging, and manipulating nanoscale processes ...
Investigating Gene Activation Dynamics in Human Polycomb Chromatin with Synthetic Reader-Effectors
Просмотров 882 месяца назад
Dr. Karmella Haynes presents an invited talk at the 2024 Symposium on Physical Genomics at Northwestern University. Karmella Haynes is an Assistant Professor of Biomedical Engineering at Emory University. She earned her Ph.D. studying epigenetics and chromatin in Drosophila at Washington University, St. Louis. Postdoctoral fellowships at Davidson College and Harvard Medical School introduced he...
Modeling of Nucleosome Clustering in Euchromatin Resulting from Interactions Between Reader Proteins
Просмотров 272 месяца назад
Joseph Wakim, PhD Candidate, Spakowitz Group, Stanford University The Spakowitz lab is engaged in projects that address fundamental chemical and physical phenomena underlying a range of biological processes and soft-material applications. Current research in the lab focuses on four main research themes: chromosomal organization and dynamics, protein self-assembly, polymer membranes, and charge ...
Ultraresolution Imaging Through Deep Tissue and a New Information-Based Theoretical Resolution Limit
Просмотров 872 месяца назад
Dr. Fang Huang presents an invited talk at the 2024 Symposium on Physical Genomics at Northwestern University. Prof. Huang is the Reilly Associate Professor of Biomedical Engineering at Purdue University. His research focuses on developing novel optical imaging technologies to make significant advances in defining the structure and function of cellular constituents in live cells and tissues wit...
Super-Resolution Imaging of Chromatin Structure and Dynamics in Health & Disease: Melike Lakadamyali
Просмотров 982 месяца назад
Dr. Melike Lakadamyali gives an invited lecture at the 2024 Symposium on Physical Genomics at Northwestern University. Dr. Lakadamyali obtained her BS in Physics in 2001 from the University of Texas, Austin and her PhD in Physics in 2006 from Harvard University. Dr. Lakadamyali started her independent group at ICFO-Institute of Photonic Sciences in Barcelona in 2010 and was awarded tenure in 20...
Gene Regulation in Cellular Senescence - Masashi Narita
Просмотров 1262 месяца назад
Masashi Narita gives the keynote lecture at the 2024 Symposium on Physical Genomics at Northwestern University. Dr. Narita is a group leader at Cancer Research UK, Cambridge Institute (CRUK-CI) and Professor of Senobiology in the Department of Oncology at the University of Cambridge. Originally trained as a surgeon in Osaka, Japan, Masashi pursued a basic research PhD focusing on apoptosis befo...
3D Chromatin Rewiring During Melanoma Phenotypic Transition - Pietro Berico
Просмотров 584 месяца назад
Melanoma intra-tumor heterogeneity is thought to be the root cause of cancer progression and therapy resistance. Melanoma cells can transiently “switch” between different transcriptional states or phenotypes as an adaptive response to microenvironmental cues. Genetic studies in patient cohorts, cell lines and melanoma mouse models have failed to identify drivers of phenotype transition, suggest...
Fossils of Ancient Chromosomes - Erez Lieberman Aiden
Просмотров 1795 месяцев назад
Erez Lieberman Aiden is an applied mathematician and a molecular biologist. He received his PhD from Harvard and MIT in 2010, and spent several years at Harvard's Society of Fellows and at Google as Visiting Faculty before moving to the Baylor College of Medicine, where he is now an Associate Professor. His laboratory’s primary emphasis is on exploring the three dimensional structure of the hum...
The X Factor: Unveiling the Secrets of the X-Chromosome with Data-Driven 3D Modeling - Anna Lappala
Просмотров 3936 месяцев назад
Anna Lappala, PhD - Harvard University To advance our understanding of the genetic underpinnings of sex-specific diseases, a deeper exploration of the X-chromosome structure and function is essential. In this talk, Dr. Lappala delves into how data-driven 3D modeling techniques have provided novel insights into the X-chromosome organization and its role in health and disease. The presentation co...
Towards an Understanding of Chromatin Remodeler Function in Development at Single-Cell Resolution
Просмотров 1719 месяцев назад
Towards an Understanding of Chromatin Remodeler Function in Development at Single-Cell Resolution
Genomics and Transcriptomics of Heart Disease
Просмотров 11710 месяцев назад
Genomics and Transcriptomics of Heart Disease
WWT/CPGE Seminar: A Day in the Life of a Data Scientist
Просмотров 1510 месяцев назад
WWT/CPGE Seminar: A Day in the Life of a Data Scientist
Gene Structure Heterogeneity and Loop Extrusion Drive Transcriptional Noise in Human Cells
Просмотров 1,3 тыс.11 месяцев назад
Gene Structure Heterogeneity and Loop Extrusion Drive Transcriptional Noise in Human Cells
Physical Genomics Training Program Research Showcase
Просмотров 2,1 тыс.Год назад
Physical Genomics Training Program Research Showcase
Probing Principles of Genome Organization and Function - Bas van Steensel
Просмотров 268Год назад
Probing Principles of Genome Organization and Function - Bas van Steensel
2023 Symposium on Physical Genomics - Question and Answer Session II
Просмотров 37Год назад
2023 Symposium on Physical Genomics - Question and Answer Session II
2023 Symposium on Physical Genomics - Question and Answer Session I
Просмотров 11Год назад
2023 Symposium on Physical Genomics - Question and Answer Session I
Chuan He - RNA Methylation in Chromatin Regulation
Просмотров 274Год назад
Chuan He - RNA Methylation in Chromatin Regulation
Song Li - Mechano-Epigenetics for Cell Engineering
Просмотров 132Год назад
Song Li - Mechano-Epigenetics for Cell Engineering
Carolyn Larabell - Quantitative Imaging of Nuclear Organization
Просмотров 31Год назад
Carolyn Larabell - Quantitative Imaging of Nuclear Organization
Gary Karpen - New Insights into Formation, Organization and Function of Heterochromatin Condensates
Просмотров 85Год назад
Gary Karpen - New Insights into Formation, Organization and Function of Heterochromatin Condensates
Clodagh O'Shea - Cracking the Nuclear Codes: Finding Order in Chaos
Просмотров 112Год назад
Clodagh O'Shea - Cracking the Nuclear Codes: Finding Order in Chaos
Alterations in Spatial Genome Compartmentalization Associated with Constriction and Expansion
Просмотров 419Год назад
Alterations in Spatial Genome Compartmentalization Associated with Constriction and Expansion
Abnormal Mechanics in Brain Tumors: Implications for Immunotherapy - Dr. Meenal Datta
Просмотров 111Год назад
Abnormal Mechanics in Brain Tumors: Implications for Immunotherapy - Dr. Meenal Datta

Комментарии

  • @niamcd6604
    @niamcd6604 Месяц назад

    Thanks!!!

  • @EdT.-xt6yv
    @EdT.-xt6yv 8 месяцев назад

    3:40

  • @EdT.-xt6yv
    @EdT.-xt6yv 8 месяцев назад

    14:20 spatial compartment 17:00 compartmental,cell types 20:30 migration,expression GENE 25:00 contact loss in b compartment 29:00 💹expansion INHIBITOR 32:39 TOPOLOGY [✓]

  • @EdT.-xt6yv
    @EdT.-xt6yv 11 месяцев назад

    4:00 7:00 structure 12:00 models

  • @waynehowell431
    @waynehowell431 11 месяцев назад

    thank you, very very interesting .